STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRE_06550Uncharacterized protein. (467 aa)    
Predicted Functional Partners:
Cre-gei-7
Malate synthase; Belongs to the malate synthase family.
   
 
 0.905
CRE_01601
Protein kinase domain-containing protein.
   
 0.766
Cre-plk-2
Serine/threonine-protein kinase PLK.
   
 0.766
Cre-plk-1
Serine/threonine-protein kinase PLK.
   
 0.766
CRE_08412
Protein kinase domain-containing protein.
   
 0.766
CRE_30237
Uncharacterized protein.
   
 0.766
CRE_22715
Protein kinase domain-containing protein.
   
 0.766
CRE_22718
Uncharacterized protein.
   
 0.766
Cre-sep-1
CRE-SEP-1 protein.
    
 0.752
Cre-sur-6
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
    
 0.713
Your Current Organism:
Caenorhabditis remanei
NCBI taxonomy Id: 31234
Other names: C. remanei, Caenorhabditis vulgaris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.