Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SMTD_LOCUS138SF3b1 domain-containing protein. (1023 aa)    
Predicted Functional Partners:
SMTD_LOCUS9965
PSP domain-containing protein.
   
 0.996
SMTD_LOCUS8631
Splicing factor 3B subunit 5; Belongs to the SF3B5 family.
    
 0.993
A0A183P8X2
RRM domain-containing protein.
    
 0.993
A0A183PRB4
Uncharacterized protein.
   
 0.991
A0A183PT87
RRM domain-containing protein.
   
 0.988
SMTD_LOCUS6886
Uncharacterized protein.
   
 0.987
SMTD_LOCUS7472
JAB_MPN domain-containing protein.
   
 
 0.987
SMTD_LOCUS9501
Matrin-type domain-containing protein.
   
 0.987
SMTD_LOCUS6734
Uncharacterized protein.
   
 0.986
A0A183PF58
Uncharacterized protein.
   
 0.984
Your Current Organism:
Schistosoma mattheei
NCBI taxonomy Id: 31246
Other names: S. mattheei
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