STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMTD_LOCUS616Uncharacterized protein. (300 aa)    
Predicted Functional Partners:
A0A183NUZ4
Aldo_ket_red domain-containing protein.
    
 0.749
SMTD_LOCUS1947
A20-type domain-containing protein.
     
 0.656
A0A183PSM7
Cyclic nucleotide-binding domain-containing protein.
 
      0.645
A0A183Q5M2
Cyclic nucleotide-binding domain-containing protein.
  
 
  0.560
SMTD_LOCUS842
Uncharacterized protein.
   
 0.450
SMTD_LOCUS5443
BTB domain-containing protein; Belongs to the potassium channel family.
   
 0.450
A0A183PP96
BTB domain-containing protein; Belongs to the potassium channel family.
   
 0.450
SMTD_LOCUS6770
Uncharacterized protein.
    
  0.439
SMTD_LOCUS7778
Ion_trans_2 domain-containing protein.
    
  0.439
A0A183PEE9
Uncharacterized protein.
    
  0.439
Your Current Organism:
Schistosoma mattheei
NCBI taxonomy Id: 31246
Other names: S. mattheei
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