STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMTD_LOCUS719Uncharacterized protein. (222 aa)    
Predicted Functional Partners:
SMTD_LOCUS882
Uncharacterized protein.
    
 0.998
SMTD_LOCUS4672
Uncharacterized protein.
   
 0.982
A0A183PWV1
Uncharacterized protein.
   
 0.973
SMTD_LOCUS7382
XPA_C domain-containing protein.
    
 0.908
SMTD_LOCUS7986
Glycos_transf_1 domain-containing protein.
    
 0.892
A0A183Q3S5
RECA_2 domain-containing protein.
   
 0.876
A0A183Q424
Uncharacterized protein; Belongs to the RecA family.
   
 0.876
SMTD_LOCUS657
Uncharacterized protein.
   
 0.873
SMTD_LOCUS8096
ERCC4 domain-containing protein.
    
 0.860
A0A183Q0D9
Uncharacterized protein.
    
 0.860
Your Current Organism:
Schistosoma mattheei
NCBI taxonomy Id: 31246
Other names: S. mattheei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.