Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
SMTD_LOCUS798DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family. (329 aa)    
Predicted Functional Partners:
SMTD_LOCUS791
Uncharacterized protein.
 
  
  0.972
A0A183NYQ3
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
   
 0.963
SMTD_LOCUS6058
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
   
 0.952
A0A183P983
Uncharacterized protein.
   
 0.939
SMTD_LOCUS7312
Uncharacterized protein.
   
 
 0.891
A0A183P9K0
Uncharacterized protein.
   
 
 0.837
A0A183PE43
RPOL_N domain-containing protein.
 
      0.786
A0A183PHH8
Uncharacterized protein.
     
 0.721
A0A183NEB8
POLAc domain-containing protein.
   
 
 0.693
SMTD_LOCUS1679
DNApol_Exo domain-containing protein.
   
 
 0.693
Your Current Organism:
Schistosoma mattheei
NCBI taxonomy Id: 31246
Other names: S. mattheei
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