STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMTD_LOCUS900XK-related protein. (300 aa)    
Predicted Functional Partners:
A0A183PTH7
HMG box domain-containing protein.
      
 0.502
SMTD_LOCUS1741
Uncharacterized protein.
      
 0.495
A0A183PKL7
4Fe-4S ferredoxin-type domain-containing protein.
      
 0.495
SMTD_LOCUS6018
Uncharacterized protein.
      
 0.457
SMTD_LOCUS1402
CBM21 domain-containing protein.
      
 0.431
SMTD_LOCUS8661
CBM21 domain-containing protein.
      
 0.431
SMTD_LOCUS249
ACPS domain-containing protein.
      
 0.405
Your Current Organism:
Schistosoma mattheei
NCBI taxonomy Id: 31246
Other names: S. mattheei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.