Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SMTD_LOCUS1953Uncharacterized protein. (172 aa)    
Predicted Functional Partners:
SMTD_LOCUS6880
DNA ligase.
  
 0.976
SMTD_LOCUS9446
DNA_pol_D_N domain-containing protein.
   
 0.970
SMTD_LOCUS7622
Uncharacterized protein.
   
 0.958
SMTD_LOCUS882
Uncharacterized protein.
   
 0.957
A0A183PCK7
Checkpoint protein; Belongs to the HUS1 family.
    
 0.950
A0A183PFU7
Uncharacterized protein.
   
 0.948
SMTD_LOCUS8727
AAA domain-containing protein.
   
 0.943
A0A183P8J1
Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
  
 
 0.943
SMTD_LOCUS657
Uncharacterized protein.
   
 
 0.938
SMTD_LOCUS1584
Uncharacterized protein.
  
 0.934
Your Current Organism:
Schistosoma mattheei
NCBI taxonomy Id: 31246
Other names: S. mattheei
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