STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMTD_LOCUS1953Uncharacterized protein. (172 aa)    
Predicted Functional Partners:
A0A183Q6X2
Uncharacterized protein.
  
 0.999
SMTD_LOCUS6880
DNA ligase.
  
 0.988
SMTD_LOCUS9446
DNA_pol_D_N domain-containing protein.
   
 0.976
SMTD_LOCUS1584
Uncharacterized protein.
  
 0.967
A0A183PJA9
Mre11_DNA_bind domain-containing protein; Belongs to the MRE11/RAD32 family.
  
 0.967
SMTD_LOCUS4231
Uncharacterized protein.
   
 0.959
SMTD_LOCUS7622
Uncharacterized protein.
   
 0.946
SMTD_LOCUS8727
AAA domain-containing protein.
   
 0.942
A0A183PCA2
Uncharacterized protein.
    
 0.936
SMTD_LOCUS9184
DNA primase; Belongs to the eukaryotic-type primase small subunit family.
   
 
 0.933
Your Current Organism:
Schistosoma mattheei
NCBI taxonomy Id: 31246
Other names: S. mattheei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.