Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A183NJS6Uncharacterized protein. (149 aa)    
Predicted Functional Partners:
A0A183Q7V5
Uncharacterized protein.
   
 0.955
SMTD_LOCUS8651
ANK_REP_REGION domain-containing protein.
    
 0.840
SMTD_LOCUS9863
PDZ domain-containing protein.
    
 0.840
A0A183PD13
Uncharacterized protein.
    
 0.840
A0A183P8P9
Uncharacterized protein.
    
 0.833
SMTD_LOCUS5256
Uncharacterized protein.
    
 0.727
SMTD_LOCUS164
Ubiquitin carboxyl-terminal hydrolase.
   
 0.704
SMTD_LOCUS9131
Uncharacterized protein.
    
 0.678
A0A183PAG5
Uncharacterized protein.
   
 0.677
A0A183PSI2
Protein kinase domain-containing protein.
   
 0.677
Your Current Organism:
Schistosoma mattheei
NCBI taxonomy Id: 31246
Other names: S. mattheei
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