Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
A0A183NJS8Uncharacterized protein. (177 aa)    
Predicted Functional Partners:
A0A183P7D9
FATC domain-containing protein.
    
 0.948
A0A183P8J3
Uncharacterized protein.
    
 0.948
A0A183PH27
DNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family.
    
 
 0.941
A0A183P6R9
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.934
A0A183PA30
RNA_pol_Rpb1_5 domain-containing protein.
    
 
 0.934
A0A183NDW8
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
 
 0.930
SMTD_LOCUS1505
RNA_pol_Rpb2_3 domain-containing protein; Belongs to the RNA polymerase beta chain family.
    
 
 0.907
SMTD_LOCUS8095
Uncharacterized protein.
    
 
 0.907
SMTD_LOCUS5707
Uncharacterized protein.
   
 
 0.896
A0A183NSM0
Uncharacterized protein.
    
 
 0.894
Your Current Organism:
Schistosoma mattheei
NCBI taxonomy Id: 31246
Other names: S. mattheei
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