Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SMTD_LOCUS2550Uncharacterized protein. (264 aa)    
Predicted Functional Partners:
SMTD_LOCUS8957
Bin3-type SAM domain-containing protein.
    
 
 0.848
A0A183NTR4
Uncharacterized protein; Belongs to the MT-A70-like family.
   
  
 0.688
A0A183PYM8
Uncharacterized protein.
      
 0.629
SMTD_LOCUS6876
Uncharacterized protein; Belongs to the MT-A70-like family.
   
  
 0.626
SMTD_LOCUS1463
YTH domain-containing protein.
      
 0.596
SMTD_LOCUS6387
Uncharacterized protein.
      
 0.593
A0A183PGD3
CTCHY-type domain-containing protein.
   
  
 0.565
SMTD_LOCUS5364
KH_dom_type_1 domain-containing protein.
      
 0.559
A0A183P913
RING-type domain-containing protein.
      
 0.553
A0A183P1M8
Uncharacterized protein.
      
 0.549
Your Current Organism:
Schistosoma mattheei
NCBI taxonomy Id: 31246
Other names: S. mattheei
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