STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMTD_LOCUS2998GPN-loop GTPase 2; Small GTPase required for proper localization of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. (243 aa)    
Predicted Functional Partners:
SMTD_LOCUS6946
GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import.
    
 
 0.979
SMTD_LOCUS5318
Uncharacterized protein.
    
 0.967
SMTD_LOCUS7398
Uncharacterized protein.
    
 0.967
A0A183PNH6
DH domain-containing protein.
    
 0.967
A0A183PTL8
Uncharacterized protein.
    
 0.967
A0A183Q7V5
Uncharacterized protein.
  
 0.956
A0A183PX33
RPOLD domain-containing protein.
   
 
 0.955
A0A183Q2P1
RNA_pol_L_2 domain-containing protein.
    
 
 0.932
A0A183P8P9
Uncharacterized protein.
   
 0.896
SMTD_LOCUS8651
ANK_REP_REGION domain-containing protein.
   
 0.865
Your Current Organism:
Schistosoma mattheei
NCBI taxonomy Id: 31246
Other names: S. mattheei
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