Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SMTD_LOCUS4020Uncharacterized protein. (96 aa)    
Predicted Functional Partners:
A0A183PC51
FYVE-type domain-containing protein.
   
 0.966
A0A183PD62
C2 domain-containing protein.
   
 0.966
SMTD_LOCUS805
Uncharacterized protein.
    
 0.630
A0A183NLL9
Uncharacterized protein.
    
 0.630
A0A183PST5
PDZ domain-containing protein.
    
 0.630
SMTD_LOCUS694
Uncharacterized protein.
    
 0.570
SMTD_LOCUS8221
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.570
A0A183PAH8
SynN domain-containing protein.
    
 0.570
A0A183PG16
Uncharacterized protein.
   
 
 0.565
SMTD_LOCUS910
Protein kinase domain-containing protein.
   
 
  0.563
Your Current Organism:
Schistosoma mattheei
NCBI taxonomy Id: 31246
Other names: S. mattheei
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