Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SMTD_LOCUS4098Uncharacterized protein. (86 aa)    
Predicted Functional Partners:
SMTD_LOCUS1155
SUFU domain-containing protein.
    
 0.929
A0A183NJV4
SUFU domain-containing protein.
    
 0.929
SMTD_LOCUS6396
SUFU_C domain-containing protein.
    
 0.929
A0A183PK13
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.920
SMTD_LOCUS5426
Frizzled domain-containing protein.
    
 0.889
SMTD_LOCUS6201
Uncharacterized protein.
    
 0.889
A0A183P9A8
Uncharacterized protein.
    
 0.889
A0A183PR69
Uncharacterized protein.
    
 0.889
A0A183PUX3
Uncharacterized protein.
    
 0.889
SMTD_LOCUS4654
Uncharacterized protein; Belongs to the protein kinase superfamily.
    
  0.800
Your Current Organism:
Schistosoma mattheei
NCBI taxonomy Id: 31246
Other names: S. mattheei
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