Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SMTD_LOCUS5809Uncharacterized protein. (487 aa)    
Predicted Functional Partners:
SMTD_LOCUS7622
Uncharacterized protein.
   
 0.997
SMTD_LOCUS8727
AAA domain-containing protein.
   
 0.997
A0A183Q2J5
Uncharacterized protein.
   
 0.996
SMTD_LOCUS5217
Uncharacterized protein.
   
 0.989
A0A183P9B4
AAA domain-containing protein.
   
 0.989
A0A183PNZ4
AAA domain-containing protein.
   
 0.985
A0A183Q6L3
Rep_fac_C domain-containing protein.
   
 0.985
A0A183NKT6
Uncharacterized protein.
   
 0.957
A0A183PQB8
ATPase_AAA_core domain-containing protein.
   
 0.957
SMTD_LOCUS9184
DNA primase; Belongs to the eukaryotic-type primase small subunit family.
   
 
 0.943
Your Current Organism:
Schistosoma mattheei
NCBI taxonomy Id: 31246
Other names: S. mattheei
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