STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMTD_LOCUS7718Uncharacterized protein. (348 aa)    
Predicted Functional Partners:
SMTD_LOCUS8375
RuvB-like helicase; Belongs to the RuvB family.
   
 
 0.965
A0A183P7A1
Nop domain-containing protein.
    
 
 0.952
SMTD_LOCUS7868
RuvB-like helicase.
   
 
 0.949
A0A183PZ36
RuvB-like helicase.
   
 
 0.949
SMTD_LOCUS3533
Uncharacterized protein.
    
 
 0.874
A0A183Q4S2
TPR_REGION domain-containing protein.
    
 
 0.874
SMTD_LOCUS5707
Uncharacterized protein.
    
 
 0.770
SMTD_LOCUS9934
Uncharacterized protein.
    
 
 0.747
SMTD_LOCUS6574
Telomere_reg-2 domain-containing protein.
    
 
 0.737
A0A183NWG1
Uncharacterized protein.
    
 
 0.713
Your Current Organism:
Schistosoma mattheei
NCBI taxonomy Id: 31246
Other names: S. mattheei
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.