Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SMTD_LOCUS7718Uncharacterized protein. (348 aa)    
Predicted Functional Partners:
SMTD_LOCUS8375
RuvB-like helicase; Belongs to the RuvB family.
   
 
 0.950
A0A183P7A1
Nop domain-containing protein.
    
 
 0.920
SMTD_LOCUS7868
RuvB-like helicase.
   
 
 0.915
A0A183PZ36
RuvB-like helicase.
   
 
 0.915
SMTD_LOCUS3533
Uncharacterized protein.
    
 
 0.912
A0A183Q4S2
TPR_REGION domain-containing protein.
    
 
 0.912
A0A183P9P8
Uncharacterized protein.
   
 
 0.869
SMTD_LOCUS5707
Uncharacterized protein.
   
 
 0.867
SMTD_LOCUS6574
Telomere_reg-2 domain-containing protein.
    
 
 0.840
SMTD_LOCUS9934
Uncharacterized protein.
    
 
 0.837
Your Current Organism:
Schistosoma mattheei
NCBI taxonomy Id: 31246
Other names: S. mattheei
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