Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUH12627.1 | CUH12703.1 | JSE7799_00217 | JSE7799_00220 | Hypothetical protein. | Putative permease, DMT superfamily. | 0.592 |
CUH12627.1 | dacB | JSE7799_00217 | JSE7799_00219 | Hypothetical protein. | D-alanyl-D-alanine carboxypeptidase DacB precursor. | 0.725 |
CUH12627.1 | trmL | JSE7799_00217 | JSE7799_00218 | Hypothetical protein. | Putative tRNA (cytidine(34)-2'-O)-methyltransferase; Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide. | 0.686 |
CUH12703.1 | CUH12627.1 | JSE7799_00220 | JSE7799_00217 | Putative permease, DMT superfamily. | Hypothetical protein. | 0.592 |
CUH12703.1 | CUH26750.1 | JSE7799_00220 | JSE7799_00749 | Putative permease, DMT superfamily. | Carboxylate/amino acid/amine transporter. | 0.587 |
CUH12703.1 | dacB | JSE7799_00220 | JSE7799_00219 | Putative permease, DMT superfamily. | D-alanyl-D-alanine carboxypeptidase DacB precursor. | 0.548 |
CUH12703.1 | trmL | JSE7799_00220 | JSE7799_00218 | Putative permease, DMT superfamily. | Putative tRNA (cytidine(34)-2'-O)-methyltransferase; Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide. | 0.607 |
CUH12703.1 | yijE | JSE7799_00220 | JSE7799_02985 | Putative permease, DMT superfamily. | Putative inner membrane transporter yiJE. | 0.483 |
CUH26750.1 | CUH12703.1 | JSE7799_00749 | JSE7799_00220 | Carboxylate/amino acid/amine transporter. | Putative permease, DMT superfamily. | 0.587 |
dacB | CUH12627.1 | JSE7799_00219 | JSE7799_00217 | D-alanyl-D-alanine carboxypeptidase DacB precursor. | Hypothetical protein. | 0.725 |
dacB | CUH12703.1 | JSE7799_00219 | JSE7799_00220 | D-alanyl-D-alanine carboxypeptidase DacB precursor. | Putative permease, DMT superfamily. | 0.548 |
dacB | trmL | JSE7799_00219 | JSE7799_00218 | D-alanyl-D-alanine carboxypeptidase DacB precursor. | Putative tRNA (cytidine(34)-2'-O)-methyltransferase; Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide. | 0.785 |
trmL | CUH12627.1 | JSE7799_00218 | JSE7799_00217 | Putative tRNA (cytidine(34)-2'-O)-methyltransferase; Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide. | Hypothetical protein. | 0.686 |
trmL | CUH12703.1 | JSE7799_00218 | JSE7799_00220 | Putative tRNA (cytidine(34)-2'-O)-methyltransferase; Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide. | Putative permease, DMT superfamily. | 0.607 |
trmL | dacB | JSE7799_00218 | JSE7799_00219 | Putative tRNA (cytidine(34)-2'-O)-methyltransferase; Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide. | D-alanyl-D-alanine carboxypeptidase DacB precursor. | 0.785 |
yijE | CUH12703.1 | JSE7799_02985 | JSE7799_00220 | Putative inner membrane transporter yiJE. | Putative permease, DMT superfamily. | 0.483 |