STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUH26763.1Hypothetical protein. (203 aa)    
Predicted Functional Partners:
CUH08176.1
Hypothetical protein.
  
     0.753
CUH39921.1
Core-2/I-Branching enzyme.
  
     0.730
CUH35162.1
Hypothetical protein.
  
     0.729
CUH39592.1
PAS domain protein.
  
     0.720
CUH39691.1
Hypothetical protein.
  
     0.715
CUH39923.1
Hypothetical protein.
  
     0.705
CUH10801.1
Divergent polysaccharide deacetylase.
  
     0.680
CUH39922.1
Hypothetical protein.
  
     0.658
CUH26738.1
Hypothetical protein.
 
     0.624
CUH39871.1
Hypothetical protein.
  
     0.623
Your Current Organism:
Jannaschia seosinensis
NCBI taxonomy Id: 313367
Other names: J. seosinensis, JCM 13035, Jannaschia seosinensis Choi et al. 2006, Jannaschia sp. CL-SP26, KCCM 42114, strain CL-SP26
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.