Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
echA8_2Putative enoyl-CoA hydratase echA8. (258 aa)    
Predicted Functional Partners:
mmgB
Putative 3-hydroxybutyryl-CoA dehydrogenase.
 0.991
arcB
Aerobic respiration control sensor protein ArcB.
   
 0.867
lcdH
L-carnitine dehydrogenase.
 
  0.777
paaG_2
1,2-epoxyphenylacetyl-CoA isomerase.
 
 
0.771
paaG_1
1,2-epoxyphenylacetyl-CoA isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 
0.769
paaZ
Bifunctional protein PaaZ.
  
 0.760
fadJ_1
Fatty acid oxidation complex subunit alpha.
 
 
0.759
fadJ_3
Fatty acid oxidation complex subunit alpha; Belongs to the enoyl-CoA hydratase/isomerase family.
   
  0.706
fadA_1
Putative acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
   
  0.703
thlA
Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
   
  0.703
Your Current Organism:
Jannaschia seosinensis
NCBI taxonomy Id: 313367
Other names: J. seosinensis, JCM 13035, Jannaschia seosinensis Choi et al. 2006, Jannaschia sp. CL-SP26, KCCM 42114, strain CL-SP26
Server load: low (18%) [HD]