STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUH35050.1Putative transporter component. (146 aa)    
Predicted Functional Partners:
CUH35060.1
Putative transporter component.
 
   
 0.966
blh_3
Beta-lactamase hydrolase-like protein.
 
     0.918
CUH35031.1
Putative sulfate transporterc/MT1781.
 
    0.750
bigR
Biofilm growth-associated repressor.
 
     0.679
tusA
Sulfurtransferase TusA; Belongs to the sulfur carrier protein TusA family.
  
  
 0.595
blh_1
Beta-lactamase hydrolase-like protein.
 
     0.470
blh_2
Beta-lactamase hydrolase-like protein.
       0.457
sir
Sulfite reductase [ferredoxin].
  
    0.447
gltB
Glutamate synthase [NADPH] large chain precursor.
      
 0.426
Your Current Organism:
Jannaschia seosinensis
NCBI taxonomy Id: 313367
Other names: J. seosinensis, JCM 13035, Jannaschia seosinensis Choi et al. 2006, Jannaschia sp. CL-SP26, KCCM 42114, strain CL-SP26
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.