Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUH39156.1 | luxA | JSE7799_01877 | JSE7799_01856 | Flavin reductase like domain protein. | Alkanal monooxygenase alpha chain. | 0.573 |
CUH39156.1 | paaE | JSE7799_01877 | JSE7799_01728 | Flavin reductase like domain protein. | 1,2-phenylacetyl-CoA epoxidase, subunit E. | 0.409 |
CUH39156.1 | preA | JSE7799_01877 | JSE7799_02442 | Flavin reductase like domain protein. | NAD-dependent dihydropyrimidine dehydrogenase subunit PreA. | 0.714 |
CUH39723.1 | fdr | JSE7799_02451 | JSE7799_00641 | Putative thiamine biosynthesis protein. | Ferredoxin--NAD(P)(+) reductase fdr. | 0.674 |
CUH39723.1 | luxA | JSE7799_02451 | JSE7799_01856 | Putative thiamine biosynthesis protein. | Alkanal monooxygenase alpha chain. | 0.701 |
CUH39723.1 | opuCA | JSE7799_02451 | JSE7799_02447 | Putative thiamine biosynthesis protein. | Carnitine transport ATP-binding protein OpuCA. | 0.976 |
CUH39723.1 | preA | JSE7799_02451 | JSE7799_02442 | Putative thiamine biosynthesis protein. | NAD-dependent dihydropyrimidine dehydrogenase subunit PreA. | 0.673 |
CUH39723.1 | ttrA | JSE7799_02451 | JSE7799_03626 | Putative thiamine biosynthesis protein. | Tetrathionate reductase subunit A precursor; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.446 |
CUH40560.1 | fdr | JSE7799_03295 | JSE7799_00641 | Putative thiamine biosynthesis protein. | Ferredoxin--NAD(P)(+) reductase fdr. | 0.674 |
CUH40560.1 | luxA | JSE7799_03295 | JSE7799_01856 | Putative thiamine biosynthesis protein. | Alkanal monooxygenase alpha chain. | 0.701 |
CUH40560.1 | opuCA | JSE7799_03295 | JSE7799_02447 | Putative thiamine biosynthesis protein. | Carnitine transport ATP-binding protein OpuCA. | 0.867 |
CUH40560.1 | ttrA | JSE7799_03295 | JSE7799_03626 | Putative thiamine biosynthesis protein. | Tetrathionate reductase subunit A precursor; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.446 |
fdr | CUH39723.1 | JSE7799_00641 | JSE7799_02451 | Ferredoxin--NAD(P)(+) reductase fdr. | Putative thiamine biosynthesis protein. | 0.674 |
fdr | CUH40560.1 | JSE7799_00641 | JSE7799_03295 | Ferredoxin--NAD(P)(+) reductase fdr. | Putative thiamine biosynthesis protein. | 0.674 |
fdr | gcvT_1 | JSE7799_00641 | JSE7799_01772 | Ferredoxin--NAD(P)(+) reductase fdr. | Aminomethyltransferase; Belongs to the GcvT family. | 0.986 |
fdr | luxA | JSE7799_00641 | JSE7799_01856 | Ferredoxin--NAD(P)(+) reductase fdr. | Alkanal monooxygenase alpha chain. | 0.756 |
fdr | opuCA | JSE7799_00641 | JSE7799_02447 | Ferredoxin--NAD(P)(+) reductase fdr. | Carnitine transport ATP-binding protein OpuCA. | 0.472 |
fdr | paaE | JSE7799_00641 | JSE7799_01728 | Ferredoxin--NAD(P)(+) reductase fdr. | 1,2-phenylacetyl-CoA epoxidase, subunit E. | 0.974 |
fdr | preA | JSE7799_00641 | JSE7799_02442 | Ferredoxin--NAD(P)(+) reductase fdr. | NAD-dependent dihydropyrimidine dehydrogenase subunit PreA. | 0.532 |
fdr | ttrA | JSE7799_00641 | JSE7799_03626 | Ferredoxin--NAD(P)(+) reductase fdr. | Tetrathionate reductase subunit A precursor; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.883 |
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