STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
djlADnaJ-like protein DjlA. (226 aa)    
Predicted Functional Partners:
CUH40789.1
SUF system FeS assembly protein, NifU family.
  
 
 0.996
dnaK
Heat shock protein 70; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 
 0.979
erpA
Iron-sulfur cluster insertion protein ErpA; Belongs to the HesB/IscA family.
  
 
 0.883
iscA
Iron-sulfur cluster assembly protein; Belongs to the HesB/IscA family.
  
 
 0.883
nifS
Putative cysteine desulfurase NifS.
  
 
 0.853
grxD
Monothiol glutaredoxin; Belongs to the glutaredoxin family. Monothiol subfamily.
     
 0.783
cobS_1
Cobalamin synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.
       0.779
fliL
Flagellar FliL protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
    
   0.752
CUH39769.1
Hypothetical protein.
       0.704
iscR
HTH-type transcriptional regulator IscR.
  
  
 0.663
Your Current Organism:
Jannaschia seosinensis
NCBI taxonomy Id: 313367
Other names: J. seosinensis, JCM 13035, Jannaschia seosinensis Choi et al. 2006, Jannaschia sp. CL-SP26, KCCM 42114, strain CL-SP26
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.