Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUH39842.1 | potA_1 | JSE7799_02570 | JSE7799_02569 | ABC-type uncharacterized transport system, periplasmic component. | Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. | 0.988 |
CUH39842.1 | potA_3 | JSE7799_02570 | JSE7799_03001 | ABC-type uncharacterized transport system, periplasmic component. | Spermidine/putrescine import ATP-binding protein PotA; Belongs to the ABC transporter superfamily. | 0.883 |
CUH39842.1 | potB | JSE7799_02570 | JSE7799_03003 | ABC-type uncharacterized transport system, periplasmic component. | Spermidine/putrescine transport system permease protein PotB. | 0.907 |
CUH39842.1 | potH | JSE7799_02570 | JSE7799_02571 | ABC-type uncharacterized transport system, periplasmic component. | Putrescine transport system permease protein PotH. | 0.986 |
CUH39842.1 | ydcV_1 | JSE7799_02570 | JSE7799_02572 | ABC-type uncharacterized transport system, periplasmic component. | Inner membrane ABC transporter permease protein YdcV. | 0.995 |
CUH39842.1 | ydcV_2 | JSE7799_02570 | JSE7799_03002 | ABC-type uncharacterized transport system, periplasmic component. | Inner membrane ABC transporter permease protein YdcV. | 0.944 |
CUH40414.1 | cysW_3 | JSE7799_03146 | JSE7799_02418 | Hypothetical protein. | Sulfate transport system permease protein CysW. | 0.947 |
CUH40414.1 | potA_1 | JSE7799_03146 | JSE7799_02569 | Hypothetical protein. | Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. | 0.774 |
CUH40414.1 | potA_3 | JSE7799_03146 | JSE7799_03001 | Hypothetical protein. | Spermidine/putrescine import ATP-binding protein PotA; Belongs to the ABC transporter superfamily. | 0.774 |
cysW_3 | CUH40414.1 | JSE7799_02418 | JSE7799_03146 | Sulfate transport system permease protein CysW. | Hypothetical protein. | 0.947 |
cysW_3 | futA1 | JSE7799_02418 | JSE7799_01187 | Sulfate transport system permease protein CysW. | Iron uptake protein A1 precursor. | 0.992 |
cysW_3 | potA_1 | JSE7799_02418 | JSE7799_02569 | Sulfate transport system permease protein CysW. | Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. | 0.782 |
cysW_3 | potA_3 | JSE7799_02418 | JSE7799_03001 | Sulfate transport system permease protein CysW. | Spermidine/putrescine import ATP-binding protein PotA; Belongs to the ABC transporter superfamily. | 0.820 |
futA1 | cysW_3 | JSE7799_01187 | JSE7799_02418 | Iron uptake protein A1 precursor. | Sulfate transport system permease protein CysW. | 0.992 |
futA1 | potA_1 | JSE7799_01187 | JSE7799_02569 | Iron uptake protein A1 precursor. | Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. | 0.797 |
futA1 | potA_3 | JSE7799_01187 | JSE7799_03001 | Iron uptake protein A1 precursor. | Spermidine/putrescine import ATP-binding protein PotA; Belongs to the ABC transporter superfamily. | 0.828 |
futA1 | potB | JSE7799_01187 | JSE7799_03003 | Iron uptake protein A1 precursor. | Spermidine/putrescine transport system permease protein PotB. | 0.410 |
potA_1 | CUH39842.1 | JSE7799_02569 | JSE7799_02570 | Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. | ABC-type uncharacterized transport system, periplasmic component. | 0.988 |
potA_1 | CUH40414.1 | JSE7799_02569 | JSE7799_03146 | Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. | Hypothetical protein. | 0.774 |
potA_1 | cysW_3 | JSE7799_02569 | JSE7799_02418 | Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. | Sulfate transport system permease protein CysW. | 0.782 |
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