STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUH40108.1Blue-light-activated histidine kinase. (402 aa)    
Predicted Functional Partners:
cheB3
Chemotaxis response regulator protein-glutamate methylesterase of group 3 operon.
 
 0.993
arcB
Aerobic respiration control sensor protein ArcB.
  
 0.991
CUH26608.1
Chemotaxis methyltransferase CheR.
 
 0.976
pdtaR_1
Putative transcriptional regulatory protein pdtaR.
 
 0.972
CUH39557.1
Blue-light-activated histidine kinase 1.
 
 
0.964
CUH39626.1
Blue-light-activated histidine kinase 1.
 
 
0.964
pdtaR_2
Putative transcriptional regulatory protein pdtaR.
 
 0.953
adrA
Putative diguanylate cyclase AdrA.
  
 0.944
CUH33606.1
Blue-light-activated protein.
 
 
 0.906
rsbP
Phosphoserine phosphatase RsbP.
  
 0.899
Your Current Organism:
Jannaschia seosinensis
NCBI taxonomy Id: 313367
Other names: J. seosinensis, JCM 13035, Jannaschia seosinensis Choi et al. 2006, Jannaschia sp. CL-SP26, KCCM 42114, strain CL-SP26
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