Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUH23791.1 | CUH38304.1 | JSE7799_00644 | JSE7799_01393 | Hypothetical protein. | Hypothetical protein. | 0.494 |
CUH23791.1 | CUH39643.1 | JSE7799_00644 | JSE7799_02370 | Hypothetical protein. | DNA polymerase III subunit chi. | 0.726 |
CUH23791.1 | CUH39761.1 | JSE7799_00644 | JSE7799_02489 | Hypothetical protein. | GcrA cell cycle regulator. | 0.508 |
CUH23791.1 | CUH40245.1 | JSE7799_00644 | JSE7799_02975 | Hypothetical protein. | DnaJ domain protein. | 0.665 |
CUH23791.1 | atpG_2 | JSE7799_00644 | JSE7799_02848 | Hypothetical protein. | F-type ATPase subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. | 0.665 |
CUH23791.1 | cobS_2 | JSE7799_00644 | JSE7799_02973 | Hypothetical protein. | Aerobic cobaltochelatase subunit CobS. | 0.542 |
CUH23791.1 | cobT | JSE7799_00644 | JSE7799_02971 | Hypothetical protein. | Aerobic cobaltochelatase subunit CobT. | 0.684 |
CUH38304.1 | CUH23791.1 | JSE7799_01393 | JSE7799_00644 | Hypothetical protein. | Hypothetical protein. | 0.494 |
CUH38304.1 | CUH38780.1 | JSE7799_01393 | JSE7799_01502 | Hypothetical protein. | YGGT family protein. | 0.461 |
CUH38304.1 | CUH39643.1 | JSE7799_01393 | JSE7799_02370 | Hypothetical protein. | DNA polymerase III subunit chi. | 0.539 |
CUH38304.1 | CUH39761.1 | JSE7799_01393 | JSE7799_02489 | Hypothetical protein. | GcrA cell cycle regulator. | 0.486 |
CUH38304.1 | CUH40245.1 | JSE7799_01393 | JSE7799_02975 | Hypothetical protein. | DnaJ domain protein. | 0.575 |
CUH38304.1 | atpG_2 | JSE7799_01393 | JSE7799_02848 | Hypothetical protein. | F-type ATPase subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. | 0.625 |
CUH38304.1 | cobS_2 | JSE7799_01393 | JSE7799_02973 | Hypothetical protein. | Aerobic cobaltochelatase subunit CobS. | 0.428 |
CUH38304.1 | cobT | JSE7799_01393 | JSE7799_02971 | Hypothetical protein. | Aerobic cobaltochelatase subunit CobT. | 0.615 |
CUH38780.1 | CUH38304.1 | JSE7799_01502 | JSE7799_01393 | YGGT family protein. | Hypothetical protein. | 0.461 |
CUH38780.1 | CUH39761.1 | JSE7799_01502 | JSE7799_02489 | YGGT family protein. | GcrA cell cycle regulator. | 0.520 |
CUH38780.1 | CUH40245.1 | JSE7799_01502 | JSE7799_02975 | YGGT family protein. | DnaJ domain protein. | 0.553 |
CUH38780.1 | cobT | JSE7799_01502 | JSE7799_02971 | YGGT family protein. | Aerobic cobaltochelatase subunit CobT. | 0.652 |
CUH39643.1 | CUH23791.1 | JSE7799_02370 | JSE7799_00644 | DNA polymerase III subunit chi. | Hypothetical protein. | 0.726 |
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