STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUH40373.1Hypothetical protein. (210 aa)    
Predicted Functional Partners:
CUH40375.1
Hypothetical protein.
 
     0.781
CUH17801.1
Hypothetical protein.
 
     0.780
CUH40199.1
Hypothetical protein.
 
     0.780
CUH17697.1
Hypothetical protein.
 
     0.778
CUH17714.1
Hypothetical protein.
 
     0.778
CUH40193.1
Hypothetical protein.
 
     0.778
CUH40194.1
Hypothetical protein.
 
     0.778
CUH40370.1
Hypothetical protein.
 
     0.778
CUH40371.1
Hypothetical protein.
 
     0.778
CUH17646.1
Phage-related minor tail protein.
 
     0.775
Your Current Organism:
Jannaschia seosinensis
NCBI taxonomy Id: 313367
Other names: J. seosinensis, JCM 13035, Jannaschia seosinensis Choi et al. 2006, Jannaschia sp. CL-SP26, KCCM 42114, strain CL-SP26
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.