STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI32429.1dGTPase; Belongs to the dGTPase family. Type 2 subfamily. (389 aa)    
Predicted Functional Partners:
surE
5'-nucleotidase /3'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
    
  0.867
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
   
 
  0.851
SHI32397.1
Iron-sulfur cluster assembly accessory protein; Belongs to the HesB/IscA family.
     
 0.774
amn
AMP nucleosidase; Catalyzes the hydrolysis of the N-glycosidic bond of AMP to form adenine and ribose 5-phosphate. Involved in regulation of AMP concentrations.
    
 0.546
SHJ60039.1
Putative redox protein.
    
  0.546
smc
Condensin subunit Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family.
    
  0.514
recO
DNA replication and repair protein RecO; Involved in DNA repair and RecF pathway recombination.
 
   
 0.511
SHI36146.1
2-haloacid dehalogenase.
    
  0.500
dnaG
DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.
    
 0.500
SHI84922.1
Glutamate synthase (NADPH/NADH) large chain.
       0.461
Your Current Organism:
Maribius salinus
NCBI taxonomy Id: 313368
Other names: DSM 26892, JCM 13037, KCCM 42113, M. salinus, Maribius salinus Choi et al. 2007, Palleronia salina, Rhodobacteraceae bacterium CL-SP27, strain CL-SP27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.