STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI39717.1Iron-regulated ABC transporter membrane component SufB. (513 aa)    
Predicted Functional Partners:
SHI39848.1
Fe-S cluster assembly ATP-binding protein.
 0.999
SHI39886.1
Fe-S cluster assembly protein SufD.
0.999
SHI39979.1
Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 0.998
SHI37529.1
FeS assembly SUF system protein.
   
 0.959
SHI37432.1
Iron-sulfur cluster assembly protein; Belongs to the HesB/IscA family.
  
 
 0.947
SHI39681.1
Cysteine desulfurase.
  
 
 0.938
SHI44440.1
NifU homolog involved in Fe-S cluster formation.
  
 
 0.926
SHI47731.1
Cysteine desulfuration protein SufE.
 
 
 0.880
SHI39647.1
Transcriptional regulator, BadM/Rrf2 family.
     
 0.815
SHI39615.1
Hypothetical protein.
     
 0.753
Your Current Organism:
Maribius salinus
NCBI taxonomy Id: 313368
Other names: DSM 26892, JCM 13037, KCCM 42113, M. salinus, Maribius salinus Choi et al. 2007, Palleronia salina, Rhodobacteraceae bacterium CL-SP27, strain CL-SP27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.