STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI50543.1Carbon-monoxide dehydrogenase medium subunit. (262 aa)    
Predicted Functional Partners:
SHI50616.1
Carbon-monoxide dehydrogenase small subunit.
 0.999
SHI50580.1
Carbon-monoxide dehydrogenase large subunit.
 
 0.998
SHI48136.1
Carbon-monoxide dehydrogenase large subunit.
 
 0.995
SHJ50685.1
Xanthine dehydrogenase YagT iron-sulfur-binding subunit.
 0.987
SHJ50628.1
Xanthine dehydrogenase YagR molybdenum-binding subunit.
 
 0.985
SHI67877.1
Isoquinoline 1-oxidoreductase, alpha subunit.
  
 0.958
SHJ81540.1
Isoquinoline 1-oxidoreductase, alpha subunit.
  
 0.958
SHI50649.1
Hypothetical protein.
 
 
 0.944
SHJ02574.1
Xanthine dehydrogenase accessory factor.
 
 
 0.906
SHI37904.1
Isoquinoline 1-oxidoreductase, beta subunit.
  
 0.798
Your Current Organism:
Maribius salinus
NCBI taxonomy Id: 313368
Other names: DSM 26892, JCM 13037, KCCM 42113, M. salinus, Maribius salinus Choi et al. 2007, Palleronia salina, Rhodobacteraceae bacterium CL-SP27, strain CL-SP27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.