STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI63425.1Predicted amidophosphoribosyltransferases. (239 aa)    
Predicted Functional Partners:
SHI62898.1
DNA repair protein RadC; Belongs to the UPF0758 family.
 
    0.953
SHI65713.1
Flagellar motility protein MotE, a chaperone for MotC folding.
   
    0.923
SHI90610.1
DNA recombination-mediator protein A.
 
 
 0.919
SHI65322.1
Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
   
   0.869
SHI65857.1
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
   
    0.855
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.844
SHJ67014.1
N-acetylglucosamine 6-phosphate deacetylase.
  
    0.828
SHI33942.1
Competence protein ComEC.
 
  
 0.810
SHJ07881.1
Capsular polysaccharide transport system ATP-binding protein.
   
    0.810
SHJ04808.1
DNA-binding transcriptional regulator, MarR family.
  
    0.806
Your Current Organism:
Maribius salinus
NCBI taxonomy Id: 313368
Other names: DSM 26892, JCM 13037, KCCM 42113, M. salinus, Maribius salinus Choi et al. 2007, Palleronia salina, Rhodobacteraceae bacterium CL-SP27, strain CL-SP27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.