STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI71689.1NlpC/P60 family protein. (277 aa)    
Predicted Functional Partners:
SHI71661.1
Leucyl aminopeptidase; Belongs to the peptidase M17 family.
       0.849
SHI49095.1
N-acetylmuramoyl-L-alanine amidase.
 
 
 0.789
SHJ00370.1
N-acetylmuramoyl-L-alanine amidase.
  
 
 0.755
SHJ07656.1
Penicillin-binding protein 2.
     
 0.725
SHJ79285.1
Cell division protein FtsI (penicillin-binding protein 3).
     
 0.720
SHJ43715.1
D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4).
    
  0.697
SHI65823.1
Flagellar FliL protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
   
   0.645
murC
UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
  
 
  0.643
SHI44440.1
NifU homolog involved in Fe-S cluster formation.
  
     0.625
SHI44593.1
Protein of unknown function.
  
     0.611
Your Current Organism:
Maribius salinus
NCBI taxonomy Id: 313368
Other names: DSM 26892, JCM 13037, KCCM 42113, M. salinus, Maribius salinus Choi et al. 2007, Palleronia salina, Rhodobacteraceae bacterium CL-SP27, strain CL-SP27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.