STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI74849.1Ribulose-5-phosphate 4-epimerase/Fuculose-1-phosphate aldolase. (215 aa)    
Predicted Functional Partners:
SHI74881.1
Uncharacterized conserved protein YgbK, DUF1537 family.
 
  0.996
SHJ17439.1
D-ribulokinase.
 
 
 0.915
SHI74779.1
Hydroxypyruvate isomerase; Belongs to the hyi family.
 
 
  0.907
mtnA
Methylthioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P).
 
 
 0.898
SHI74916.1
3-hydroxyisobutyrate dehydrogenase.
 
    0.873
SHI74946.1
Nucleoside-diphosphate-sugar epimerase.
 
     0.855
tpiA
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
  
 
 0.850
SHI74748.1
Transketolase.
    
  0.839
SHI74716.1
Transketolase.
    
  0.836
SHJ17954.1
Ribulose-bisphosphate carboxylase large chain; Belongs to the RuBisCO large chain family.
  
 
 0.826
Your Current Organism:
Maribius salinus
NCBI taxonomy Id: 313368
Other names: DSM 26892, JCM 13037, KCCM 42113, M. salinus, Maribius salinus Choi et al. 2007, Palleronia salina, Rhodobacteraceae bacterium CL-SP27, strain CL-SP27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.