STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI85176.1Hypothetical protein. (95 aa)    
Predicted Functional Partners:
SHI85220.1
Transcriptional regulatory protein, C terminal.
 
     0.962
SHI85122.1
Hypothetical protein.
 
     0.819
SHJ02898.1
Hypothetical protein.
  
     0.705
SHJ16149.1
Hypothetical protein.
  
     0.623
SHI89947.1
TPR repeat-containing protein.
  
     0.614
SHJ36247.1
Sporulation related domain-containing protein.
  
     0.559
SHI74294.1
Cell division transport system permease protein.
  
     0.545
SHJ47350.1
Two-component system, OmpR family, sensor histidine kinase ChvG.
  
     0.513
SHI49437.1
Protein of unknown function.
  
     0.502
SHI91196.1
Hypothetical protein.
  
     0.489
Your Current Organism:
Maribius salinus
NCBI taxonomy Id: 313368
Other names: DSM 26892, JCM 13037, KCCM 42113, M. salinus, Maribius salinus Choi et al. 2007, Palleronia salina, Rhodobacteraceae bacterium CL-SP27, strain CL-SP27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.