STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI81898.1Mannose ABC transporter ATP-binding protein. (261 aa)    
Predicted Functional Partners:
SHI81864.1
Mannose ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
  0.981
SHI81827.1
Mannose-binding protein/fructose-binding protein/ribose-binding protein.
 
  0.974
SHJ17371.1
D-xylose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  0.877
SHI81798.1
Transcriptional regulator, MarR family.
 
   
 0.845
SHJ75646.1
Rhamnose transport system substrate-binding protein.
 
  0.821
SHJ17311.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-).
 
 
  0.810
SHJ61891.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family (TC 3.A.1.4.-); Belongs to the binding-protein-dependent transport system permease family.
 
   
  0.809
SHJ32348.1
Transcriptional regulator, LacI family.
  
  0.795
SHJ32783.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-); Belongs to the binding-protein-dependent transport system permease family.
    
 
0.793
SHJ25274.1
Xylose-binding protein.
 
  0.770
Your Current Organism:
Maribius salinus
NCBI taxonomy Id: 313368
Other names: DSM 26892, JCM 13037, KCCM 42113, M. salinus, Maribius salinus Choi et al. 2007, Palleronia salina, Rhodobacteraceae bacterium CL-SP27, strain CL-SP27
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