STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI91761.1Acetoin utilization deacetylase AcuC. (368 aa)    
Predicted Functional Partners:
SHJ14971.1
Cytochrome c.
    
 0.879
SHJ42366.1
Hypothetical protein.
    
  0.853
SHJ14218.1
Methyltransferase domain-containing protein.
    
 0.811
smc
Condensin subunit Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family.
    
 0.789
SHI91721.1
Hypothetical protein.
       0.773
SHJ07743.1
Glyoxylate/hydroxypyruvate reductase A.
   
 0.735
SHI71461.1
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 0.729
SHI75799.1
Putative lumazine-binding.
    
  0.725
SHJ37494.1
Protease I.
    
  0.725
SHI91688.1
Predicted thiol-disulfide oxidoreductase YuxK, DCC family.
  
    0.718
Your Current Organism:
Maribius salinus
NCBI taxonomy Id: 313368
Other names: DSM 26892, JCM 13037, KCCM 42113, M. salinus, Maribius salinus Choi et al. 2007, Palleronia salina, Rhodobacteraceae bacterium CL-SP27, strain CL-SP27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.