STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ07881.1Capsular polysaccharide transport system ATP-binding protein. (219 aa)    
Predicted Functional Partners:
SHI62756.1
ABC-type polysaccharide/polyol phosphate export permease.
 
 0.999
SHJ07907.1
Capsular polysaccharide transport system permease protein.
 
 
 0.999
SHJ58820.1
Polysaccharide export outer membrane protein.
 
 
 0.984
SHJ58852.1
Capsular polysaccharide export protein.
 
  
 0.978
SHJ05183.1
Polysaccharide export outer membrane protein.
 
 
 0.967
SHI62582.1
Glycosyl transferase family 2.
 
  
 0.846
SHI62611.1
Glycosyl transferase family 2.
 
  
 0.846
SHJ58796.1
Capsular polysaccharide export protein.
 
   
 0.844
SHJ42203.1
Core-2/I-Branching enzyme.
 
  
 0.822
SHI63425.1
Predicted amidophosphoribosyltransferases.
   
    0.810
Your Current Organism:
Maribius salinus
NCBI taxonomy Id: 313368
Other names: DSM 26892, JCM 13037, KCCM 42113, M. salinus, Maribius salinus Choi et al. 2007, Palleronia salina, Rhodobacteraceae bacterium CL-SP27, strain CL-SP27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.