STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ22283.1LAO/AO transport system kinase. (330 aa)    
Predicted Functional Partners:
SHI99480.1
methylmalonyl-CoA mutase.
 
 0.999
SHJ24520.1
(R)-ethylmalonyl-CoA mutase.
 
 0.999
SHJ69697.1
methylmalonyl-CoA epimerase.
 
  
  0.904
SHI99808.1
propionyl-CoA carboxylase carboxyltransferase subunit.
 
  
  0.729
SHJ22245.1
ATP-dependent helicase HrpB.
       0.728
rpmB
LSU ribosomal protein L28P; Belongs to the bacterial ribosomal protein bL28 family.
       0.679
SHJ32217.1
4-hydroxyphenylpyruvate dioxygenase.
    
  0.637
SHJ22215.1
Hypothetical protein.
       0.562
SHJ02574.1
Xanthine dehydrogenase accessory factor.
 
      0.543
SHI91310.1
alpha-methylacyl-CoA racemase; Belongs to the CoA-transferase III family.
    
  0.521
Your Current Organism:
Maribius salinus
NCBI taxonomy Id: 313368
Other names: DSM 26892, JCM 13037, KCCM 42113, M. salinus, Maribius salinus Choi et al. 2007, Palleronia salina, Rhodobacteraceae bacterium CL-SP27, strain CL-SP27
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.