STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ38922.1Hypothetical protein. (436 aa)    
Predicted Functional Partners:
SHJ39021.1
His Kinase A (phospho-acceptor) domain-containing protein.
 
   
 0.871
SHJ38985.1
Hypothetical protein.
 
     0.824
SHJ38953.1
Response regulator receiver domain-containing protein.
 
   
 0.752
nadE
NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
     
 0.710
SHJ38889.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family (TC 3.A.1.4.-).
 
     0.672
SHJ24452.1
Succinate dehydrogenase subunit B; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
    
 0.660
SHJ31031.1
Nucleoid-associated protein YgaU, contains BON and LysM domains.
  
  
 0.648
SHJ04288.1
Phasin protein.
  
     0.635
glcB
Malate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
 
   
 0.618
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
    
  0.590
Your Current Organism:
Maribius salinus
NCBI taxonomy Id: 313368
Other names: DSM 26892, JCM 13037, KCCM 42113, M. salinus, Maribius salinus Choi et al. 2007, Palleronia salina, Rhodobacteraceae bacterium CL-SP27, strain CL-SP27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.