STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ36037.1Protein of unknown function. (74 aa)    
Predicted Functional Partners:
SHJ68924.1
Protein of unknown function.
  
     0.719
SHI44133.1
2'-5' RNA ligase superfamily protein.
 
     0.700
SHJ36011.1
Hypothetical protein.
       0.586
SHJ36067.1
Protein of unknown function.
       0.551
SHJ38709.1
Hypothetical protein.
  
     0.508
SHJ35985.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
       0.450
SHJ44822.1
Predicted arabinose efflux permease, MFS family.
  
     0.448
SHI99285.1
Rho termination factor, N-terminal domain.
  
     0.429
SHI45202.1
Protein of unknown function.
  
     0.426
SHI72749.1
Short-chain dehydrogenase.
  
     0.421
Your Current Organism:
Maribius salinus
NCBI taxonomy Id: 313368
Other names: DSM 26892, JCM 13037, KCCM 42113, M. salinus, Maribius salinus Choi et al. 2007, Palleronia salina, Rhodobacteraceae bacterium CL-SP27, strain CL-SP27
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.