STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ55928.1Aa3 type cytochrome c oxidase subunit IV. (44 aa)    
Predicted Functional Partners:
SHJ55959.1
Hypothetical protein.
       0.773
SHJ55892.1
Hypothetical protein.
 
     0.709
SHI33163.1
Hypothetical protein.
  
     0.531
SHJ55830.1
phenylacetate-CoA ligase.
       0.529
SHJ55862.1
Putative peptidoglycan binding domain-containing protein.
       0.529
SHJ15479.1
Hypothetical protein.
  
     0.489
SHI33598.1
Holin of 3TMs, for gene-transfer release.
  
     0.478
SHJ24423.1
Hypothetical protein.
  
     0.455
SHI46061.1
Hypothetical protein.
  
     0.450
SHJ42953.1
V8-like Glu-specific endopeptidase.
  
     0.402
Your Current Organism:
Maribius salinus
NCBI taxonomy Id: 313368
Other names: DSM 26892, JCM 13037, KCCM 42113, M. salinus, Maribius salinus Choi et al. 2007, Palleronia salina, Rhodobacteraceae bacterium CL-SP27, strain CL-SP27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.