STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ67450.1Hypothetical protein. (415 aa)    
Predicted Functional Partners:
SHJ67489.1
Hypothetical protein.
 
     0.959
SHJ67566.1
Acetolactate synthase-1/2/3 large subunit; Belongs to the TPP enzyme family.
 
     0.880
SHJ67418.1
Polyhydroxybutyrate depolymerase.
 
     0.776
SHJ26121.1
Hypothetical protein.
  
     0.697
SHJ67325.1
Glucans biosynthesis protein; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs).
 
     0.665
SHJ67386.1
Membrane glycosyltransferase.
 
     0.655
SHJ67527.1
formyl-CoA transferase; Belongs to the CoA-transferase III family.
       0.496
Your Current Organism:
Maribius salinus
NCBI taxonomy Id: 313368
Other names: DSM 26892, JCM 13037, KCCM 42113, M. salinus, Maribius salinus Choi et al. 2007, Palleronia salina, Rhodobacteraceae bacterium CL-SP27, strain CL-SP27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.