STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ73787.1Transcriptional regulator, LacI family. (344 aa)    
Predicted Functional Partners:
SHI84922.1
Glutamate synthase (NADPH/NADH) large chain.
    
 
 0.957
SHJ73843.1
TRAP-type C4-dicarboxylate transport system, substrate-binding protein.
 
     0.775
SHJ47246.1
Phosphocarrier protein.
   
 
 0.755
SHJ32348.1
Transcriptional regulator, LacI family.
  
 
  0.691
SHJ74002.1
Threonine dehydrogenase.
 
 
   0.669
SHJ73873.1
TRAP-type C4-dicarboxylate transport system, small permease component.
 
     0.659
SHJ73966.1
Gluconate 5-dehydrogenase.
 
 
   0.598
cysC
Sulfate adenylyltransferase; Catalyzes the synthesis of activated sulfate.
   
 
 0.574
SHJ73815.1
Hypothetical protein.
       0.529
hisD-2
Sulfopropanediol 3-dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
 
   
 0.511
Your Current Organism:
Maribius salinus
NCBI taxonomy Id: 313368
Other names: DSM 26892, JCM 13037, KCCM 42113, M. salinus, Maribius salinus Choi et al. 2007, Palleronia salina, Rhodobacteraceae bacterium CL-SP27, strain CL-SP27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.