STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ75714.1Glycosyltransferase involved in cell wall bisynthesis. (354 aa)    
Predicted Functional Partners:
SHJ75903.1
Methyltransferase domain-containing protein.
     0.981
SHJ77681.1
ATP-dependent DNA helicase RecQ.
    
 
 0.945
SHI38716.1
Hypothetical glycoside hydrolase 5.
  
 0.903
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.869
SHJ75998.1
Phosphoglycerol transferase MdoB.
 
  
 0.863
SHJ75849.1
Hypothetical protein.
 
    0.827
SHJ75872.1
6-pyruvoyl-tetrahydropterin synthase.
 
     0.827
SHJ75968.1
Uncharacterized membrane protein YbhN, UPF0104 family.
 
    0.804
SHJ76031.1
CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
     0.798
SHJ75741.1
Myo-inositol-1(or 4)-monophosphatase.
       0.773
Your Current Organism:
Maribius salinus
NCBI taxonomy Id: 313368
Other names: DSM 26892, JCM 13037, KCCM 42113, M. salinus, Maribius salinus Choi et al. 2007, Palleronia salina, Rhodobacteraceae bacterium CL-SP27, strain CL-SP27
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