STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ76283.1GntR family transcriptional regulator. (331 aa)    
Predicted Functional Partners:
SHJ76319.1
Creatinine amidohydrolase.
 
     0.948
SHJ76345.1
2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.
 
     0.944
SHJ76382.1
3-oxoacyl-[acyl-carrier protein] reductase.
 
     0.882
SHJ76416.1
Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family.
 
     0.851
SHJ76442.1
Beta-aspartyl-peptidase (threonine type).
 
     0.840
SHJ76249.1
Peptide/nickel transport system substrate-binding protein.
 
     0.792
SHI86067.1
Putative transcriptional regulator; Belongs to the UPF0301 (AlgH) family.
   
    0.652
SHJ12566.1
Site-specific DNA-methyltransferase (adenine-specific).
   
    0.551
SHJ76091.1
Carboxypeptidase Taq; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues.
 
     0.463
SHI66291.1
Flagellar hook-associated protein 3 FlgL; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
  
     0.461
Your Current Organism:
Maribius salinus
NCBI taxonomy Id: 313368
Other names: DSM 26892, JCM 13037, KCCM 42113, M. salinus, Maribius salinus Choi et al. 2007, Palleronia salina, Rhodobacteraceae bacterium CL-SP27, strain CL-SP27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.