STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ80573.1Nicotinamidase-related amidase. (283 aa)    
Predicted Functional Partners:
SHJ80550.1
Hypothetical protein.
 
     0.854
SHI35508.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
   
 
  0.767
SHJ53195.1
4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family.
   
 
  0.760
SHJ63307.1
Dimethylglycine dehydrogenase; Belongs to the GcvT family.
   
 
  0.760
SHJ80647.1
Hypothetical protein.
 
     0.757
SHJ49638.1
Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
  
  0.721
SHJ73583.1
Maleate isomerase.
    
 0.721
SHJ38395.1
Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family.
  
 
  0.718
SHJ80623.1
Transcriptional regulator, AraC family.
 
     0.671
SHJ80698.1
Uncharacterized peroxidase-related enzyme; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
 
    0.644
Your Current Organism:
Maribius salinus
NCBI taxonomy Id: 313368
Other names: DSM 26892, JCM 13037, KCCM 42113, M. salinus, Maribius salinus Choi et al. 2007, Palleronia salina, Rhodobacteraceae bacterium CL-SP27, strain CL-SP27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.