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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_00545Hypothetical protein; COG0353 Recombinational DNA repair protein (RecF pathway). (302 aa)    
Predicted Functional Partners:
JNB_00535
COG1643 HrpA-like helicases.
       0.651
JNB_00525
COG4842 Uncharacterized protein conserved in bacteria.
       0.582
JNB_00530
Hypothetical protein.
       0.582
JNB_00540
Hypothetical protein.
       0.581
JNB_03055
MetH; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
     
 0.473
JNB_02170
Hypothetical protein.
   
    0.461
JNB_02175
Hypothetical protein; COG0443 Molecular chaperone.
   
    0.461
JNB_05959
Pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein.
   
    0.461
JNB_12134
Hypothetical protein; COG0748 Putative heme iron utilization protein.
   
    0.461
JNB_14578
Hypothetical protein; COG0259 Pyridoxamine-phosphate oxidase.
   
    0.461
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.