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JNB_00545 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_00545" - Uncharacterized protein in Janibacter sp. HTCC2649
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_00545Uncharacterized protein (302 aa)    
Predicted Functional Partners:
JNB_02650
Uncharacterized protein (232 aa)
   
          0.754
JNB_02815
RNA polymerase-binding protein RbpA ; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters (120 aa)
   
          0.701
JNB_02010
Uncharacterized protein (195 aa)
   
        0.677
JNB_07334
Uncharacterized protein (481 aa)
   
          0.676
rpoZ
Transcriptase subunit omega ; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta’ subunit thereby facilitating its interaction with the beta and alpha subunits (87 aa)
   
          0.672
JNB_00535
ATP-dependent helicase HrpA (1291 aa)
              0.667
JNB_00540
Uncharacterized protein (154 aa)
              0.655
JNB_00530
Uncharacterized protein (402 aa)
              0.655
JNB_00525
Uncharacterized protein (92 aa)
              0.655
JNB_03480
Uncharacterized protein (380 aa)
   
          0.627
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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