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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_00940Putative cation-transporting ATPase; COG2217 Cation transport ATPase. (656 aa)    
Predicted Functional Partners:
JNB_00935
COG0640 Predicted transcriptional regulators.
 
    0.880
JNB_01060
Putative metal-binding protein; COG2608 Copper chaperone.
  
 
 0.810
JNB_12024
Putative metal-binding protein; COG2608 Copper chaperone.
  
 
 0.810
JNB_01085
COG2132 Putative multicopper oxidases.
 
  
 0.566
JNB_00945
COG4300 Predicted permease, cadmium resistance protein.
 
    0.511
JNB_00925
Hypothetical protein; COG0526 Thiol-disulfide isomerase and thioredoxins.
     
 0.487
JNB_00930
COG0785 Cytochrome c biogenesis protein.
     
 0.482
JNB_10744
Regulatory protein, ArsR; COG0640 Predicted transcriptional regulators.
 
    0.450
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649
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