STRINGSTRING
JNB_01040 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_01040" - Transcriptional repressor SmtB in Janibacter sp. HTCC2649
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_01040Transcriptional repressor SmtB (127 aa)    
Predicted Functional Partners:
JNB_01035
Putative cation transporter (282 aa)
              0.827
JNB_01045
Uncharacterized protein (52 aa)
              0.616
JNB_01030
Putative integral membrane protein (243 aa)
              0.593
JNB_01025
Uncharacterized protein (111 aa)
              0.587
JNB_01020
Uncharacterized protein (228 aa)
              0.431
JNB_01015
Uncharacterized protein (208 aa)
              0.431
JNB_10754
Putative cation transporter (294 aa)
              0.418
JNB_05699
Co/Zn/Cd efflux system component (205 aa)
              0.418
JNB_00970
Putative cation transporter (280 aa)
              0.418
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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