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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_01355Hypothetical protein; COG0417 DNA polymerase elongation subunit (family B). (193 aa)    
Predicted Functional Partners:
JNB_01230
Integral membrane protein.
 
     0.796
JNB_01795
Hypothetical protein.
  
     0.701
rbpA
Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters.
  
     0.682
JNB_02660
Hypothetical protein; COG0789 Predicted transcriptional regulators.
  
     0.672
JNB_01805
Hypothetical protein.
  
     0.669
JNB_02500
Hypothetical protein; COG1196 Chromosome segregation ATPases.
  
     0.661
JNB_01360
Hypothetical protein; COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases.
       0.657
JNB_06819
COG3118 Thioredoxin domain-containing protein.
  
     0.622
secE
Preprotein translocase SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
  
     0.606
JNB_00680
Hypothetical protein; COG0762 Predicted integral membrane protein.
  
     0.599
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.