Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
JNB_01550Hypothetical protein; COG3568 Metal-dependent hydrolase. (225 aa)    
Predicted Functional Partners:
JNB_01545
Putative sugar kinase; COG1940 Transcriptional regulator/sugar kinase.
       0.762
JNB_01535
COG0003 Oxyanion-translocating ATPase.
       0.761
JNB_01540
Hypothetical protein.
       0.737
JNB_01530
Hypothetical protein.
       0.736
JNB_08064
Putative secreted bifunctional (alpha-amylase andendo-alpha-glucosidase) protein; COG0366 Glycosidases.
  
 
  0.658
JNB_02120
Hypothetical protein; COG0392 Predicted integral membrane protein.
 
    0.630
JNB_17608
Hypothetical protein; COG0392 Predicted integral membrane protein.
  
     0.622
JNB_18748
Putative secreted protein.
  
     0.608
JNB_11904
Hypothetical protein.
  
     0.606
JNB_16923
Hypothetical protein.
  
     0.604
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649
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