close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_01735COG0395 ABC-type sugar transport system, permease component. (317 aa)    
Predicted Functional Partners:
JNB_01745
COG1653 ABC-type sugar transport system, periplasmic component.
 
 0.999
JNB_01740
COG1175 ABC-type sugar transport systems, permease components.
 
  0.996
JNB_16454
ABC transporter ATP-binding protein; COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
 
 0.990
JNB_11344
Probable glycerol-3-phosphate ABC transporter, permease; COG1175 ABC-type sugar transport systems, permease components.
 
 0.944
JNB_06849
Hypothetical protein; COG1175 ABC-type sugar transport systems, permease components.
  0.930
JNB_01870
COG1175 ABC-type sugar transport systems, permease components.
 
  0.929
JNB_02230
Probable transmembrane transport protein; COG1175 ABC-type sugar transport systems, permease components.
 0.922
JNB_17788
Putative ABC transporter permease protein; COG1175 ABC-type sugar transport systems, permease components.
  0.899
JNB_15428
Probable ABC transporter permease protein; COG1175 ABC-type sugar transport systems, permease components.
  0.885
JNB_11009
Putative binding protein dependent transport protein; COG1175 ABC-type sugar transport systems, permease components.
 
  0.870
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.